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CNS*2020 Online

Welcome to the Sched instance for CNS*2020 Online! Please read the instruction document on detailed information on CNS*2020.

Abdullah_1

Up and coming Neuroscientist with particular interest in neurodegenerative diseases, especially modelling these diseases using organoids and computer models.

3:00pm CEST

K1: Deep reinforcement learning and its neuroscientific implications CrowdcastMatthew Botvinick

4:00pm CEST

Building mechanistic multiscale models, from molecules to networks, using NEURON and NetPyNE Link (T2)Robert A McDougal • William W Lytton • Joe Graham • Salvador Dura-Bernal

7:00pm CEST

Neuromorphic VLSI realization of the Hippocampal formation Link (T4)Anu Aggarwal

10:00pm CEST

Discussion with Matt Botvinick CrowdcastMatthew Botvinick

11:30pm CEST

Introduction to the Brain Dynamics Toolbox CrowdcastStewart Heitmann

2:00pm CEST

O2: Neural Manifold Models for Characterising Brain Circuit Dynamics in Neurodegenerative Disease CrowdcastSeigfred Prado

4:20pm CEST

O4: Towards multipurpose bio-realistic models of cortical circuits CrowdcastAnton Arkhipov

5:40pm CEST

F2: Using evolutionary algorithms to explore single-cell heterogeneity and microcircuit operation in the hippocampus CrowdcastAndrea Navas-Olive

7:00pm CEST

P115: Approximating Information Filtering of a Two-stage Neural System Slot 08Gregory Knoll P209: A Predictive Model of Serotonergic Fiber Densities Based on Reflected Fractional Brownian Motion Slot 16Skirmantas Janusonis P223: Less is More: Wiring-Economical Modular Networks Support Self-Sustained Firing-Economical Neural Avalanches for Efficient Processing Slot 05Changsong Zhou P32: Contribution of the Na/K pump to rhythmic bursting. Slot 16Ronald Calabrese P41: Reaction-diffusion simulations of astrocytic Ca2+ signals in realistic geometries Slot 09Audrey Denizot P47: Brain Dynamics and Structure-Function Relationships via Spectral Factorization and the Transfer Function Slot 12James Henderson P80: Comp-NeuroFedora, a Free/Open Source operating system for computational neuroscience: download, install, research Slot 10Ankur Sinha P85: The Neuron growth and death model and simulator Slot 07Yuko Ishiwaka P98: Bayesian mechanics in the brain under the free-energy principle Slot 02Chang-Sub Kim

8:00pm CEST

P102: Ephaptic coupling in white matter fibre bundles modulates axonal transmission delays Slot 04Thomas R. Knösche P106: Efficient communication in distributed simulations of spiking neuronal networks with gap junctions Slot 05Markus Diesmann P119: Relating transfer entropy to network structure and motifs, and implications for brain network inference Slot 10Leonardo Novelli P125: A predictive coding model of transitive inference Slot 07Moritz Moeller P144: Closed loop parameter estimation using GPU acceleration with GeNN Slot 03Felix B. Kern P16: A computational model for time cell-based learning of interval timing Slot 17Sorinel Oprisan P183: Universal fingerprints of slow-wave activity in in vivo, in vitro and in silico cortical networks Slot 01Alessandra Camassa P186: Inhibitory neurons locate at a center of effective cortical networks, and have high ability to control other neurons. Slot 01Motoki Kajiwara P190: Neural Field Theory: Modelling development of topography via activity based mechanisms. Slot 18Nicholas Gale P27: Lessons from Artificial Neural Network for studying coding principles of Biological Neural Network Slot 11Hyojin Bae P9: Introducing EBRAINS: European infrastructure for brain research Slot 04Wouter Klijn

9:00pm CEST

P116: Astrocyte simulations with realistic morphologies reveal diverse calcium transients in soma and processes Slot 08Ippa Seppala P162: Approximative models for enabling multi-scale simulations Slot 14Mikko Lehtimäki P168: Spike initiation properties in the axon: simulations in a biophysically detailed model Slot 20Nooshin Abdollahi P197: Computational Modelling of the Locus Coeruleus Slot 16Ruben Schoeters P206: Parameter exploration in neuron and synapse models driven by stimuli from living neuron recordings Slot 10Manuel Reyes-Sanchez P55: Identifying Changes in Whole-Brain Functional Connectivity in Complex Longitudinal Clinical Trials Slot 07Sidhant Chopra P62: Large Scale Discrimination between Neural Models and Experimental Data Slot 08Russell Jarvis P6: Inference of functional connectivity in living neural networks Slot 09Sarah Marzen

10:00pm CEST

Discussion with Zhaoping Li CrowdcastLi Zhaoping

11:00pm CEST

CNS Party Party: Whyville!jim Bower • Rebekah Evans

1:00pm CEST

F3: Neuronal morphology imposes a tradeoff between stability, accuracy and efficiency of synaptic scaling CrowdcastAdriano Bellotti

1:40pm CEST

O8: Finite element simulation of ionic electrodiffusion in cellular geometries CrowdcastAda Johanne Ellingsrud

2:00pm CEST

O9: Discovering synaptic mechanisms underlying the propagation of cortical activity: A model-driven experimental and data analysis approach CrowdcastHeidi Teppola

2:20pm CEST

O10: Neural flows: estimation of wave velocities and identification of singularities in 3D+t brain data CrowdcastPaula Sanz-Leon

5:40pm CEST

O12: A Spatial Developmental Generative Model of Human Brain Structural Connectivity CrowdcastStuart Oldham

6:20pm CEST

O14: Reconciling emergences: An information-theoretic approach to identify causal emergence in multivariate data CrowdcastPedro Mediano

7:00pm CEST

P104: Integrated cortical, thalamic and basal ganglia model of brain function: validation against functional requirements Slot 10Sébastien Naze P158: Controllability for nonlinear dynamic brain system under biological constrains Slot 04Jiyoung Kang P163: Biophysics and dynamics shape the cross-correlation properties of monosynaptic connections Slot 21Horacio Rotstein P165: Using dynamical mean field theory to study synchronization in the brain. Slot 07Isabelle Harris P171: Neural routing: Determination of the fastest flows and fastest routes in brain networks Slot 01Paula Sanz-Leon P73: Effects of transneuronal spreading in the logistic diffusion model of Aβ protein with longitudinal PET scans Slot 06Byeong Chang Jeong

8:00pm CEST

P12: A population level model of movement disorder oscillations and deep brain stimulation Slot 17Nada Yousif P52: Connectivity modulation by dual-site transcranial alternating current stimulation based on spike-timing dependent plasticity Slot 10Bettina Schwab P58: Systematic testing and validation of models of hippocampal neurons against electrophysiological data Slot 13Sára Sáray

9:00pm CEST

P123: Computational Implementation in NEURON of Inter-cellular Calcium Waves in Syncytial Tissue Slot 20Nilapratim Sengupta P131: Unsupervised metadata tagging of computational neuroscience literature, towards question answering Slot 09Evan Cudone P160: Dynamic causal modeling of single cell level activities observed in the calcium imaging Slot 16Jinseok Eo P29: High-order interdependencies and the functional balance of segregation-integration in the aging brain Slot 03Rodrigo Cofre P2: The monosynaptic inference problem: linking statistics and dynamics in ground truth models Slot 12Zach Saccomano P88: Phosphorylation-induced variation of NF kinetics and morphology of axon Slot 13Zelin Jia P90: Texture-like neural representations Slot 12Emil Dmitruk

10:00pm CEST

Discussion with Daniel Polani CrowdcastDaniel Polani

10:30am CEST

W2 S03: Spatiotemporal properties of Ca2+ activity in single astrocytes and astrocytic networks Crowdcast (W02)Alexey Semyanov

11:00am CEST

W2 S04: Patterns of astrocytic Ca2+ activity: from imaging to modeling and back. Crowdcast (W02)Alexey Brazhe

12:00pm CEST

W2 S05: Exploring the origin of spatiotemporal patterns of glial calcium by a compartmental model of astrocytic physiology Crowdcast (W02)Maurizio De Pitta

12:30pm CEST

W2 S06: Cloud-based parallel computing of cellular dynamics in a realistic model of astroglia Crowdcast (W02)Leonid Savtchenko

1:00pm CEST

Discussion with Geoffrey Goodhill CrowdcastGeoffrey J. Goodhill

2:00pm CEST

W05 S00: Opening Remarks On Spatiotemporal Dynamics in Neuroimaging: Models and Analysis Crowdcast (W05)Paula Sanz-Leon • James Roberts • Changsong Zhou • Yujiang Wang • Patricio Orio • Katharina Glomb • John Griffiths • Johan van der Meer

3:00pm CEST

W1 S0: Methods of Information Theory in Comptuational Neuroscience - Opening Remarks Crowdcast (W01)Joseph Lizier W2 S07: Online methods for real-time analysis of calcium imaging data Crowdcast (W02)Johannes Friedrich

3:30pm CEST

W2 S08: Multiphoton imaging of calcium signals in populations of hippocampal neurons during behaviour in mouse models of neurodegenerative disorders Crowdcast (W02)Simon Schultz

4:30pm CEST

W2 S10: Calcium as trigger of synaptic plasticity Crowdcast (W02)Michael Graupner W4 S2: The Virtual Brain (TVB) and Virtual Brain Cloud Crowdcast (W04)Petra Ritter

5:00pm CEST

W06 S1: An overview of data, tools, and computational analysis at the Allen Insitute Crowdcast (W06)Michael Hawrylycz W1 S3: Using lossy representations to find the neural code? Crowdcast (W01)Sarah Marzen W4 S3: Arbor Simulator Crowdcast (W04)Ben Cumming

5:15pm CEST

W10-1. Getting the most out of computational models of hippocampal interneurons Crowdcast (W10)Frances Skinner

5:45pm CEST

W1 S4: Motifs for processes on networks Crowdcast (W01)Alice Schwarze

6:00pm CEST

W06 S3: Identifying the molecular signatures of CA1 projection classes Crowdcast (W06)Gabriela Michel W10-2 Cellular mechanisms of the visual EEG alpha rhythm. Crowdcast (W10)Roger D. Traub W4 S4: NEST Simulator Crowdcast (W04)Charl Linssen

6:45pm CEST

W06 S4: The Allen Mouse Common Coordinate Framework: a 3D reference atlas enabling data integration Crowdcast (W06)Lydia Ng W10-3 Excitation-inhibition interactions govern the dynamics of spiking sequences and their replays: Combining modeling, electrophysiology and calcium imaging. Crowdcast (W10)Jiannis Taxidis

7:00pm CEST

W4 S5: The Brian Simulator Crowdcast (W04)Dan Goodman

7:15pm CEST

W06 S5: A practical guide to accessing and using Allen Mouse Brain Connectivity Atlas data Crowdcast (W06)Jennifer Whitesell

8:15pm CEST

W06 S7: Deep brain discovery: Learning how to interpret variability in neural structure Crowdcast (W06)Eva Dyer

8:30pm CEST

W4 S8: The SONATA data format and the Brain Modeling Toolkit (BMTK) Crowdcast (W04)Anton Arkhipov

8:45pm CEST

W06 S8: Discussion Crowdcast (W06)

10:00am CEST

W2 S11: Modeling calcium signaling in live animals Crowdcast (W02)James Sneyd

10:30am CEST

W2 S12: Calcium signalling in cellular space Crowdcast (W02)Shawn Means

11:00am CEST

W2 S13: Calcium: a mediator between metabolism and cell fate Crowdcast (W02)Alexander Skupin

11:30am CEST

W2 S14: Antipodes of calcium signalling: subcellular microdomains and whole cell calcium spikes Crowdcast (W02)Rüdiger Thul

3:00pm CEST

W2 S18: Analyzing and modeling the kinetics and evolution of Ca2+-permeable β amyloid pores associated with Alzheimer’s disease Crowdcast (W02)Ghanim Ullah

3:30pm CEST

W2 S19: Enabling real-time brain-machine interfaces via tensor-based computing Crowdcast (W02)Andrea Giovannucci

4:00pm CEST

W4 S9: PyNN modeling tool Crowdcast (W04)Andrew Davison

4:30pm CEST

W2 S21: Exploring the origin of spatiotemporal patterns of glial calcium by a compartmental model of astrocytic physiology Crowdcast (W02)Evan Cresswell-Clay W4 S10: The Human Brain Project (HBP) Brain Simulation Platform (BSP) Crowdcast (W04)Luca Bologna W9 S1 - Machine learning and mechanistic modeling for understanding brain in health and disease Crowdcast (W09)William W Lytton • Sam Neymotin

5:15pm CEST

W9 S3 - Multi-level modelling of the brain: from intracellular signaling and neurovascular coupling to whole-body cross-talk and clinical implementations Crowdcast (W09)Gunnar Cedersund

6:00pm CEST

W06 S11: Mapping the Connectivity of Cell Types with EM Connectomics Crowdcast (W06)Nuno da Costa W4 S12: NeuroML and Open Source Brain Crowdcast (W04)Padraig Gleeson

7:00pm CEST

W06 S12: Probing Cell Types with Open Connectomics Datasets and Tools Crowdcast (W06)Forrest Collman W4 Discussion 2: Should detailed modeling be more widely used? should tools/standards converge or diversify? Crowdcast (W04)Salvador Dura-Bernal • Kael Dai • Padraig Gleeson

7:30pm CEST

W4 S14: The Neuroscience Gateway (NSG) Crowdcast (W04)Subhashini Sivagnanam

9:45pm CEST

W9 S9 - Toward multi-scale brain data assimilation Crowdcast (W09)Kenji Doya • Carlos Gutierrez • Ken Nakae • Hiromichi Tsukada

10:15pm CEST

W9 S10 - Workshop Discussion Crowdcast (W09)Thomas Serre • Haroon Anwar • William W Lytton • Sam Neymotin • Kenji Doya • Daniel Durstewitz • Gunnar Cedersund • Danilo Bzdok • Idan Segev • Terrence Sejnowski

5:00pm CEST

W06 S16: From hypothesis to data: Open two-photon brain observatories in system neuroscience Crowdcast (W06)Jerome Lecoq

8:30pm CEST

W06 S22: Discussion Crowdcast (W06)